Publications

Published

2022

• Robert Crystal-Ornelas, Charuleka Varadharajan, Dylan O'Ryan, Kathleen Beilsmith, Ben Bond-Lamberty, Kristin Boye, Madison Burrus, Shreyas Cholia, Danielle S. Christianson, Michael Crow, Joan Damerow, Kim S. Ely, Amy E. Goldman, Susan Heinz, Valerie C. Hendrix, Zarine Kakalia, Kayla Mathes, Stephanie C. Pennington, Emily Robles, Alistair Rogers, Maegen Simmonds, Terri Velliquette, Pamela Weisenhorn, Jessica N. Welch, Karen Whitenack, and Deborah A. Agarwal. (2022) "Enabling FAIR data in Earth and environmental science with community-centric (meta)data reporting formats." Nature Scientific Data
  Github Published
• Dylan G. E. Gomes, Patrice Pottier, Robert Crystal-Ornelas, Emma J. Hudgins, Vivienne Foroughirad, Luna L Sánchez-Reyes, Rachel Turba, Paula Andrea Martinez, David Moreau, Michael Bertram, Cooper Smout, and Kaitlyn Gaynor. (2022) "Why don’t we share data and code? Perceived barriers and benefits to public archiving practices." Proceedings of the Royal Society Biological Sciences
  Preprint Published
• Kendalynn A. Morris, Shoshi Hornum, Robert Crystal-Ornelas, Stephanie C. Pennington, and Ben Bond-Lamberty. (2022) "Soil respiration response to simulated precipitation change depends on ecosystem type and duration of study." JGR Biogeosciences
  Preprint Github Published
• Philip J. Harbruck, Ross Cuthbert, Emma J. Hudgins, Robert Crystal-Ornelas, Melina Kourantidou, Ana Novoa, Desika Moodley, Chonlong Liu, Anna J. Turbelin, Boris Leroy, and Franck Courchamp. (2022) "Geographic and taxonomic drivers of rising biological invasion costs." Science of the Total Environment
  Published
• Denise J. Hills, Joan E. Damrow, Bulbul Ahmed, Nora Catolico, Srija Chakraborty, Caroline Coward, Robert Crystal-Ornelas, William Duncan, Laxmi Goparaju, Cindy Lin, Zhong Liu, Maruti Mudunuru, Yuhan Rao, Robert Rovetto, Ziheng Sun, Brandon Whitehead, Lesly Wyborn, and Tian Yao. (2022) "Earth and Space Science Informatics Perspectives on Integrated, Coordinated, Open, Networked (ICON) Science." Earth and Space Science
  Preprint Published
• Maegen B. Simmonds, William Riley, Deb Agarwal, Xingyuan Chen, Shreyas Cholia, Robert Crystal-Ornelas, Ethan T. Coon, Dipankar Dwivedi, Valerie C. Hendrix, Maoyi Huang, Ahmad Jan, Zarine Kakalia, Jitendra Kumar, Charles D. Koven, Li Li, Mario Melara, Lavanya Ramakrishnan, Daniel M. Ricciuto, Anthony P. Walker, Wei Zhi, Qing Zhu, and Charuleka Varadharajan. (2022) "Guidelines for Publicly Archiving Terrestrial Model Data to Enhance Usability, Intercomparison, and Synthesis." Data Science Journal
  Github Published
• Jean Fantle-Lepczyk, Philip J. Haubrock, Andrew M. Kramer, Ross N. Cuthbert, Anna J. Turbelin, Robert Crystal-Ornelas, Christophe Diagne, and Franck Courchamp. (2022) "Economic costs of biological invasions in the United States." Science of the Total Environment
  Published
• Ziheng Sun, Laura Sandoval, Robert Crystal-Ornelas, S. Mostafa Mousavi, Jinbo Wang, Cindy Lin, Nicoleta Cristea, Daniel Tong, Wendy Hawley Carande, Xiaogang Ma, Yuhan Rao, James A. Bednar, Amanda Tan, Jianwu Wang, Sanjay Purushotham, Thomas E. Gill, Julien Chastang, Daniel Howard, Benjamin Holt, Chandana Gangodagamage, Peisheng Zhao, Pablo Rivas, Zachary Chester, Javier Orduz, and Aji John. (2022) "A review of Earth Artificial Intelligence." Computers and Geosciences
  Published

2021

• Robert Crystal-Ornelas, Jeffrey A. Brown, Rafael E. Valentin, Caroline Beardsley, and Julie L. Lockwood. (2021) "Meta-analysis shows that overabundant deer (Cervidae) populations consistently decrease average population abundance and species richness of forest birds." Ornithological Applications
  Github Published
• Robert Crystal-Ornelas, Charuleka Varadharajan, Ben Bond-Lamberty, Kristin Boye, Madison Burrus, Shreyas Cholia, Michael Crow, Joan Damerow, Ranjeet Devarakonda, Kim S. Ely, Amy Goldman, Susan Heinz, Valerie Hendrix, Zarine Kakalia,, Stephanie C. Pennington, Emily Robles, Alistair Rogers, Maegen Simmonds, Terri Velliquette, Helen Weierbach, Pamela Weisenhorn, Jessica N. Welch, and Deborah A. Agarwal. (2021) "A Guide to Using GitHub for Developing and Versioning Data Standards and Reporting Formats." Earth and Space Science
  Github Published
• Robert Crystal-Ornelas, Emma J. Hudgins, Ross N. Cuthbert, Phillip J. Haubrock, Jean Fantle-Lepczyk, Elena Angulo, Andrew M. Kramer, Liliana Ballesteros-Mejia, Boris Leroy, Brian Leung, Eugenia López-López, Christophe Diagne, and Franck Courchamp. (2021) "Economic costs of biological invasions within North America." Neobiota
  Github Published
• Robert Crystal-Ornelas, Resham Thapa, and Katherine L. Tully. (2021) "Soil organic carbon is affected by organic amendments, conservation tillage, and cover cropping in organic farming systems: A meta-analysis." Agriculture, Ecocsystems & Environment
  Github Published
• Ben Bond-Lamberty, Danielle S. Christianson, Robert Crystal-Ornelas, Kayla Mathes, and Stephanie C. Pennington. (2021) "A reporting format for field measurements of soil respiration." Ecological Informatics
  Github Published
• Joan E. Damerow, Charuleka Varadharajan, Kristin Boye, Eoin L. Brodie, Madison Burrus, K. Dana Chadwick, Robert Crystal-Ornelas, Hesham Elbashandy, Ricardo J. Eloy Alves, Kim S. Ely, Amy E. Goldman, Ted Haberman, Valerie Hendrix, Zarine Kakalia, ..., and Deborah Agarwal. (2021) "Sample identifiers and metadata to support data mnagement and reuse in multidisciplinary ecosystem sciences." Data Science Journal
  Github Published
• Kim S.Ely, Alistair Rogers, Deborah A.Agarwal, Elizabeth A.Ainsworth, Loren P.Albert, Ashehad Ali, Jeremiah Anderson, Michael J.Aspinwall, Chandra Bellasio, Carl Bernacchi, Steve Bonnage, Thomas N. Buckley, James Bunce, Angela C.Burnett, Florian A.Busch, Amanda Cavanagh, Lucas A. Cernusak, Robert Crystal-Ornelas, Joan Damerow, ..., and Dedi Yang. (2021) "A reporting format for leaf-level gas exchange data and metadata." Ecological Informatics
  Github Published

2020

• Anjali Boyd, Kelsey E. Fisher, Lukas Lamb-Wotton, and Robert Crystal-Ornelas. (2020) "Human Dimensions: The ESA Student Section." The Bulletin of the Ecological Society of America
  Published
• Robert Crystal-Ornelas and Julie L. Lockwood. (2020) "Cumulative meta-analysis identifies declining but negative impacts of invasive species on richness after 20 years." Ecology
  Github Published
• Robert Crystal-Ornelas and Julie L. Lockwood. (2020) "The ‘known unknowns’ of invasive species impact measurement." Biological Invasions
  Github Published

2018

• Aaron M. Ellison, Carri J. LeRoy, Kim J. Landsbergen, Emily Bosanquet, David Buckley Borden, Paul J. CaraDonna, Katherine Cheney, Robert Crystal-Ornelas, Ardis DeFreece, Lissy Goralnik, Ellie Irons, Bethann Garramon Merkle, Kari E. B. O'Connell, Clint A. Penick, Lindsey Rustad, Mark Schulze, Nickolas M. Waser, and Linda M. Wysong. (2018) "Art/Science Collaborations: New Explorations of Ecological Systems, Values, and their Feedbacks." The Bulletin of the Ecological Society of America
  Published

2017

• Robert Crystal-Ornelas, Julie L. Lockwood, Phil Cassey, and Mark Hauber. (2017) "The establishment threat of the obligate brood-parasitic Pin-tailed Whydah (Vidua macroura) in North America and the Antilles." The Condor
  Github Published

Working Papers / Non-archival

2022

• Robert Crystal-Ornelas, Brandon Edwards, Katherine Hébert, Emma Hudgins, Luna L. Sánchez Reyes, Eric R. Scott, Matthew J. Grainger, Vivienne Foroughirad, Allison D. Binley, Cole B. Brookson, Kaitlyn M. Gaynor, Saeed Shafiei Sabet, Ali Güncan, Friederike Hillemann, Helen Weierbach, Dylan G. E. Gomes, and Pedro Henrique Pereira Braga. (2022) "Not just for programmers: A friendly guide to the benefits of GitHub for accelerating collaborative research in Ecology and Evolution."
  Preprint Github